Cellular Genetics IT travel guide

• The group
  • Our story
  • Our remit
  • Our vision
• Jupyter Hub
  • How to get access
  • Flavours
  • Notebooks
• Data sharing
  • Globus
  • cram files
• Data submission
  • ArrayExpress
  • EGA/ENA
• Nextflow pipelines
• ML Warehouse
  • Show me information for all the samples in a study
  • Show me information for all the samples with a cost code
  • Show me run ID, lane number and tag index for a sample
• Single Cell Visualizations
  • cellxgene
  • AnnData
  • Seurat -> h5ad
  • SingleCellExperiment -> h5ad
  • Loom -> h5ad
  • Examples
• Contact us
  • Submit a ticket
  • Coffee standups
  • Chat

Note

The creation of this travel guide was inspired by Patrick Kua